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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923297.1_cds_XP_016471940.1_64225
CDS Infomation

[gene=LOC107794007] [db_xref=GeneID:107794007] [protein=probable pectinesterase 53] [protein_id=XP_016471940.1] [location=join(66173..66564,66998..67187,67850..68053,77857..78092,78184..78334)] [gbkey=CDS]
Sequence

ATGGCATCAGCTGCACTTATTCTGTTGCTTCTCCTTGTCGTGCAATTGCCATATTCGAGA
AGCTTGTCTTTACAAAGCAGTAGCCCACTTGAAAATCAAGAAAAAGACAATGTTGGGAAG
TTAGAGGAATGGATATCTTTGAATGTGAAGCACTACAACAGAAAGAGAGCAGCAAGTTTG
AAATGGATGCAAGAATCAGTCAGAAACAGAAAACAACAAGTTCCAGCTAGTAGCCTGGAT
CCAAAGCTTAGAAATGCGGAGATGAACAAAATGATAATCAGTGTGAGTCAAGACGGAAGT
GGCAACTTTAAGACTATTAAAGAAGCTCTTGCTAGCATTCCTGTTTATAACAAGCGTCGG
GTCATATTGGACATCAAACATGGAGTTTATTGGGAAAAGATTAACATTCCAAGAAGTTTG
CCATTTGTGACATTTCGGGGGGATAGTAGCGATCCGCCGAGGATCACAGGCAATGACACA
GCTGCGGCTGCTGGAACCGACGGCAGGCCATTGAAGACATTCCAAAGCGCTACTGTTTCT
GTGGATGCTGATTATTTTGTGGCCACTAACGTCATTTTTGAGAATACAGCAGCACATGTG
GTAGGGTCGGTGGGAGAACAAGCAGTGGCACTGAGAATATCGGGGAACAAGGCAGCATTT
TACGACTGCAGTTTCTACGGAAGTCAAGACACCCTTTACGATCACAAGGGACTTCACTAT
TTCAATAATTGCTTCATCCAAGGCTCTGTTGATTTCATCTTCGGCTATGGCAGATCCCTC
TATGAGAACTGCCACTTGAACTCGGTGGCAAAGAAAGTAGCGTCCCTGACAGCCCAAAAG
CGAACAAATTCGTCAATATTAAGTGGATTCTCGTTCAAGAACAGCACCATAACAGGGACA
GGTTCGGTTTATTTGGGAAGAGCCTGGGGTGATTATTCCAGAGTAATATTTTCTTACACT
TACATGGACAAGATTGTTCTTCCCCTAGGATGGAGCGATTGGGGCAAAACAAGTCGAGAC
TCGAGAGTTTACTACGGGGAGTACAGGTGCAGTGGACCAGGAGCCAACATGACAGGAAGA
GTGCCGTGGGCACGAATACTCACCGATGAAGAGGCCACGCCTTTTATTGGCACCTATTAT
ATTGATGGCAATTCTTGGCTCATACATCCCTAG

Peptide Sequence

PEP ID

XP_016471940.1
PEP Infomation

PREDICTED: probable pectinesterase 53 [Nicotiana tabacum]
Sequence

MASAALILLLLLVVQLPYSRSLSLQSSSPLENQEKDNVGKLEEWISLNVKHYNRKRAASL
KWMQESVRNRKQQVPASSLDPKLRNAEMNKMIISVSQDGSGNFKTIKEALASIPVYNKRR
VILDIKHGVYWEKINIPRSLPFVTFRGDSSDPPRITGNDTAAAAGTDGRPLKTFQSATVS
VDADYFVATNVIFENTAAHVVGSVGEQAVALRISGNKAAFYDCSFYGSQDTLYDHKGLHY
FNNCFIQGSVDFIFGYGRSLYENCHLNSVAKKVASLTAQKRTNSSILSGFSFKNSTITGT
GSVYLGRAWGDYSRVIFSYTYMDKIVLPLGWSDWGKTSRDSRVYYGEYRCSGPGANMTGR
VPWARILTDEEATPFIGTYYIDGNSWLIHP

Transcript Sequence

Gene sequence data has not been registered.